atomic version history

- Fix embedding failures for large code blocks and improve embedding speed - Enable markdown export for Atomic Cloud users - Optimize canvas rebuilds and fix Cloud checkout issues - Update Cloud model lists with new additions for Pro and Free tiers

- Fixed text selection visibility issue when drag-selecting inside code blocks in the editor.

## v1.42.0 — 2026-07-11 - Open atoms in read mode by default — fully rendered markdown with clickable links and no accidental edits (especially on mobile). Toggle to edit with Cmd/Ctrl+E, `i`, or the titlebar button; Escape steps back to read mode then closes. Checkboxes remain toggleable and autosave from read mode - Fix the Chrome Web Store version of the web clipper failing to connect to Atomic Cloud (and self-hosted servers) due to missing CORS headers. Also fix server URLs entered without `https://` being treated as relative paths - Fix editor light-mode theming: links now follow the accent color across all themes, and the editor body no longer stays dark when the reader is in light mode or liquid-glass mode - Fix wiki article saves and SQLite-to-cloud migrations failing when wiki links reference deleted tags --- Download the assets below to install.

## v1.41.0 — 2026-07-11 - Add `migrate push` CLI command to push a local SQLite database to a remote Atomic server or Atomic Cloud tenant - Add API token management for Atomic Cloud users — create, list, and revoke account-scoped tokens from Settings without needing CLI access - Fix web app updates never reaching open browser tabs — new versions now prompt a "Refresh" toast instead of silently stalling behind stale service workers - Add admin portal for Atomic Cloud operators to manage user plans, apply comp overrides, and audit plan transitions --- Download the assets below to install.

- Updated default AI models for better performance and cost efficiency - Added "Migrate to Cloud" feature in Settings - Improved Postgres backend reliability and task scheduling - Enhanced Atomic Cloud support with better authentication and onboarding

- Reduced memory usage for read connections with smaller default page cache - Added environment variables for SQLite memory and connection-pool tuning - Improved server startup time by optimizing canvas cache warming

## v1.39.0 — 2026-05-27 - Add Reports — a new first-class primitive for automated, scheduled research over your knowledge base. Create reports with custom research prompts, cron schedules, scoped source/context tags, and citation policies. Four curated templates ship built-in: Daily Briefing, Weekly Contradiction Scan, Open Questions Status, and Monthly Themes - Add a full Reports authoring UI: template gallery for quick starts, report editor with schedule/scope/citation-policy fields, detail view with findings list, Run Now button, and a featured-report picker for the dashboard widget. The legacy Daily Briefing settings are retired — existing briefings are automatically migrated to report findings - Add a dedicated Finding reader for report outputs, with inline citation popovers, parent-report breadcrumb navigation, and a mini knowledge-graph canvas showing cited atoms - Add keyboard navigation to report dropdowns and overflow menus; improve mobile layout for the report detail view header - Fix canvas crashes caused by WebGL context exhaustion when rapidly navigating local graph views - Improve citation marker styling — inline [N] markers now use the primary text color instead of

## v1.38.0 — 2026-05-16 - Add `edit_atom` MCP tool for surgical atom edits (replace, insert after, append, replace all) usable by Claude and other MCP clients - Improve wiki updates to recognize multi-level headings (h3+) as addressable sections, and gracefully skip invalid operations instead of aborting the entire update - Fix wiki "N new atoms available" banner miscounting atoms in child tags, which could trigger spurious update prompts - Fix wiki update banner reappearing after a no-op update by advancing the baseline when no changes are proposed --- Download the assets below to install.

## v1.37.1 — 2026-05-14 - Improve MCP server reliability by replacing third-party HTTP transport with a custom implementation that handles strict client requirements for status codes and content types --- Download the assets below to install.

## v1.37.0 — 2026-05-14 - Add configurable briefing schedule with daily or weekly frequency, custom time, and timezone support - Add re-tag action in database settings to re-run auto-tagging across all atoms using the current tagging model while preserving manual tags and wiki-backed assignments - Fix edge case where pipeline jobs could get stuck and stop processing --- Download the assets below to install.

## v1.36.0 — 2026-05-13 - Add setup token requirement (`ATOMIC_SETUP_TOKEN`) for self-hosted instance claiming, with rate limiting and one-time-claim enforcement to prevent unauthorized access - Add copy buttons for local server URL and API token in desktop Settings, making it easier to configure integrations like the Obsidian plugin - Replace permissive CORS policy with an allowlist that permits only local origins and the configured public URL --- Download the assets below to install.

## v1.35.2 — 2026-05-11 - Fix tag tree failing to scroll to the selected tag after the sidebar loads asynchronously or after expanding/collapsing tag groups - Fix tag tree scroll area showing incorrect height after expanding or collapsing tag groups --- Download the assets below to install.

## v1.35.1 — 2026-05-01 - Fix duplicate embedding runs caused by the pipeline scheduler, reducing unnecessary AI provider API calls and improving background processing efficiency --- Download the assets below to install.

## v1.35.0 — 2026-05-01 - Add custom system prompt overrides for chat, briefing, and tagging — configurable from a new Prompts tab in Settings (wiki prompts moved here too) - Add per-category descriptions for auto-tag targets, letting you guide the auto-tagger with natural-language instructions on what each category should capture --- Download the assets below to install.

## v1.34.0 — 2026-04-30 - Add per-database settings overrides — when running multiple databases, AI provider, model, and other settings can now be customized independently for each database while inheriting workspace defaults - Add override indicators in Settings showing whether each field uses the workspace default or a per-database override, with a one-click reset to restore the default - Move the Auto-tagging toggle from the AI tab to the Tag Categories tab, where it can also be overridden per database --- Download the assets below to install.